Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMKR1H3BMG3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 RCC2P6-201ENST00000526625 1557 ntBASIC13.5□□□□□ -0.25
SMKR1H3BMG3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 AC016769.1-201ENST00000409132 1010 ntBASIC13.5□□□□□ -0.25
SMKR1H3BMG3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.5□□□□□ -0.25
SMKR1H3BMG3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 AC141586.5-201ENST00000624546 2050 ntBASIC13.49□□□□□ -0.25
SMKR1H3BMG3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 AC007322.1-201ENST00000426983 750 ntBASIC13.49□□□□□ -0.25
SMKR1H3BMG3 AC073210.2-201ENST00000430369 194 ntBASIC13.49□□□□□ -0.25
SMKR1H3BMG3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 AC022211.2-201ENST00000585075 2527 ntBASIC13.49□□□□□ -0.25
SMKR1H3BMG3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMKR1H3BMG3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms