Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 KRT18P6-201ENST00000555540 1265 ntBASIC19.63■□□□□ 0.73
RCCD1A6NED2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.63■□□□□ 0.73
RCCD1A6NED2 AC026271.3-201ENST00000571884 352 ntBASIC19.63■□□□□ 0.73
RCCD1A6NED2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RCCD1A6NED2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.63■□□□□ 0.73
RCCD1A6NED2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RCCD1A6NED2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RCCD1A6NED2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RCCD1A6NED2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RCCD1A6NED2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RCCD1A6NED2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RCCD1A6NED2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
RCCD1A6NED2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RCCD1A6NED2 GMCL1P1-201ENST00000463439 1581 ntBASIC19.62■□□□□ 0.73
RCCD1A6NED2 AC006116.8-202ENST00000587620 1550 ntBASIC19.62■□□□□ 0.73
RCCD1A6NED2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.62■□□□□ 0.73
RCCD1A6NED2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RCCD1A6NED2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.62■□□□□ 0.73
RCCD1A6NED2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RCCD1A6NED2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RCCD1A6NED2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.62■□□□□ 0.73
RCCD1A6NED2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RCCD1A6NED2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.62■□□□□ 0.73
RCCD1A6NED2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.62■□□□□ 0.73
RCCD1A6NED2 AF186192.3-201ENST00000583427 947 ntBASIC19.62■□□□□ 0.73
RCCD1A6NED2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.62■□□□□ 0.73
RCCD1A6NED2 MIR6786-201ENST00000616843 113 ntBASIC19.62■□□□□ 0.73
RCCD1A6NED2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RCCD1A6NED2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.62■□□□□ 0.73
RCCD1A6NED2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RCCD1A6NED2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RCCD1A6NED2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.62■□□□□ 0.73
RCCD1A6NED2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RCCD1A6NED2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
RCCD1A6NED2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RCCD1A6NED2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RCCD1A6NED2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RCCD1A6NED2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.61■□□□□ 0.73
RCCD1A6NED2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RCCD1A6NED2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RCCD1A6NED2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RCCD1A6NED2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RCCD1A6NED2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.61■□□□□ 0.73
RCCD1A6NED2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RCCD1A6NED2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RCCD1A6NED2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RCCD1A6NED2 AC006058.3-201ENST00000606217 1069 ntBASIC19.61■□□□□ 0.73
RCCD1A6NED2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RCCD1A6NED2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
RCCD1A6NED2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RCCD1A6NED2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RCCD1A6NED2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.61■□□□□ 0.73
RCCD1A6NED2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RCCD1A6NED2 SDHAP2-201ENST00000455183 2001 ntBASIC19.61■□□□□ 0.73
RCCD1A6NED2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.61■□□□□ 0.73
RCCD1A6NED2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RCCD1A6NED2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.61■□□□□ 0.73
RCCD1A6NED2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RCCD1A6NED2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RCCD1A6NED2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RCCD1A6NED2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RCCD1A6NED2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RCCD1A6NED2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RCCD1A6NED2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.6■□□□□ 0.73
RCCD1A6NED2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.6■□□□□ 0.73
RCCD1A6NED2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RCCD1A6NED2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RCCD1A6NED2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.6■□□□□ 0.73
RCCD1A6NED2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RCCD1A6NED2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RCCD1A6NED2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RCCD1A6NED2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.6■□□□□ 0.73
RCCD1A6NED2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.6■□□□□ 0.73
RCCD1A6NED2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RCCD1A6NED2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.6■□□□□ 0.73
RCCD1A6NED2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.6■□□□□ 0.73
RCCD1A6NED2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RCCD1A6NED2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RCCD1A6NED2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.59■□□□□ 0.73
RCCD1A6NED2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RCCD1A6NED2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RCCD1A6NED2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RCCD1A6NED2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RCCD1A6NED2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms