Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV7S3A2A0A539 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.77■□□□□ 0.6
TCRBV7S3A2A0A539 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV7S3A2A0A539 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV7S3A2A0A539 AP000593.1-201ENST00000393668 712 ntBASIC18.77■□□□□ 0.6
TCRBV7S3A2A0A539 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV7S3A2A0A539 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV7S3A2A0A539 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.77■□□□□ 0.6
TCRBV7S3A2A0A539 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.77■□□□□ 0.6
TCRBV7S3A2A0A539 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.77■□□□□ 0.6
TCRBV7S3A2A0A539 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV7S3A2A0A539 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV7S3A2A0A539 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV7S3A2A0A539 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV7S3A2A0A539 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TCRBV7S3A2A0A539 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.77■□□□□ 0.6
TCRBV7S3A2A0A539 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TCRBV7S3A2A0A539 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TCRBV7S3A2A0A539 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TCRBV7S3A2A0A539 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TCRBV7S3A2A0A539 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TCRBV7S3A2A0A539 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 SDHAP2-201ENST00000455183 2001 ntBASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 CA15P1-201ENST00000481698 905 ntBASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 MIR3180-5-201ENST00000583743 153 ntBASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 AC026471.5-201ENST00000615068 467 ntBASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TCRBV7S3A2A0A539 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 FZD10-202ENST00000539839 3282 ntBASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 GMCL1P1-201ENST00000463439 1581 ntBASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV7S3A2A0A539 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV7S3A2A0A539 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms