Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 AC080080.1-201ENST00000625121 2420 ntBASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 RPS2P4-201ENST00000476944 856 ntBASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 KRT18P6-201ENST00000555540 1265 ntBASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-7A0A0A0MS04 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV6-7A0A0A0MS04 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.06
TRBV6-7A0A0A0MS04 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
TRBV6-7A0A0A0MS04 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.46■□□□□ 0.06
TRBV6-7A0A0A0MS04 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.46■□□□□ 0.06
TRBV6-7A0A0A0MS04 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV6-7A0A0A0MS04 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV6-7A0A0A0MS04 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC135776.1-201ENST00000319817 2481 ntBASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 HTR7P1-201ENST00000538670 1336 ntBASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC138028.4-201ENST00000564984 1845 ntBASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 RCC2P3-201ENST00000418112 1537 ntBASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 ID1-201ENST00000376105 1233 ntBASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 AL353807.1-201ENST00000427475 662 ntBASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 CKBP1-201ENST00000565489 1086 ntBASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC026271.3-201ENST00000571884 352 ntBASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-7A0A0A0MS04 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC108860.2-201ENST00000562760 2183 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms