Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 AC005082.1-201ENST00000413042 2259 ntBASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 AL136038.3-201ENST00000561909 1096 ntBASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 AC005332.1-201ENST00000577698 1310 ntBASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
SNX9Q9Y5X1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 PCED1CP-201ENST00000419887 785 ntBASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 HLA-F-220ENST00000434407 884 ntBASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 PVRIG2P-201ENST00000435460 978 ntBASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 AC093503.3-201ENST00000624917 2352 ntBASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX9Q9Y5X1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX9Q9Y5X1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX9Q9Y5X1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX9Q9Y5X1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX9Q9Y5X1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX9Q9Y5X1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX9Q9Y5X1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX9Q9Y5X1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX9Q9Y5X1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.72■□□□□ 0.75
SNX9Q9Y5X1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX9Q9Y5X1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX9Q9Y5X1 MIR149-201ENST00000384879 89 ntBASIC19.72■□□□□ 0.75
SNX9Q9Y5X1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX9Q9Y5X1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX9Q9Y5X1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX9Q9Y5X1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX9Q9Y5X1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.72■□□□□ 0.75
SNX9Q9Y5X1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms