Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 AL121956.5-201ENST00000625261 221 ntBASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HRH3Q9Y5N1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 AL671277.2-201ENST00000458060 996 ntBASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 AL357033.4-201ENST00000617703 1807 ntBASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 AL499627.1-201ENST00000569373 2188 ntBASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HRH3Q9Y5N1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 CROCCP3-202ENST00000420820 1947 ntBASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HRH3Q9Y5N1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms