Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 DUX4L16-201ENST00000555130 1264 ntBASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 AC005181.1-201ENST00000604782 1256 ntBASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 AL139246.5-201ENST00000606645 996 ntBASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPRKBQ9Y3C4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 AL023806.1-201ENST00000603994 1649 ntBASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRKBQ9Y3C4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 AL512625.2-201ENST00000417533 625 ntBASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPRKBQ9Y3C4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.84■□□□□ 0.29
TPRKBQ9Y3C4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPRKBQ9Y3C4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPRKBQ9Y3C4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TPRKBQ9Y3C4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
TPRKBQ9Y3C4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPRKBQ9Y3C4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPRKBQ9Y3C4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPRKBQ9Y3C4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TPRKBQ9Y3C4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPRKBQ9Y3C4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TPRKBQ9Y3C4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms