Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 AC034232.1-201ENST00000506026 1064 ntBASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 MCCD1P1-208ENST00000445732 328 ntBASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 RASA4DP-201ENST00000460726 1199 ntBASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 KRT126P-201ENST00000549467 1181 ntBASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 AC006333.2-201ENST00000607957 2099 ntBASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
NPIPA1Q9UND3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 AC093503.3-201ENST00000624917 2352 ntBASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA1Q9UND3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA1Q9UND3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms