Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 COX11P1-201ENST00000489116 835 ntBASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 GCSHP2-201ENST00000560971 527 ntBASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 AL031432.5-201ENST00000641059 760 ntBASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 ABALON-201ENST00000629058 1903 ntBASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGC3Q9UN70 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 BX664615.1-201ENST00000443558 458 ntBASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 AL023973.1-201ENST00000624619 620 ntBASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC3Q9UN70 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 AL390961.4-201ENST00000623958 2535 ntBASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC3Q9UN70 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGC3Q9UN70 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGC3Q9UN70 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGC3Q9UN70 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGC3Q9UN70 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGC3Q9UN70 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGC3Q9UN70 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGC3Q9UN70 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGC3Q9UN70 AC099343.3-201ENST00000605834 2503 ntBASIC19.45■□□□□ 0.7
PCDHGC3Q9UN70 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGC3Q9UN70 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGC3Q9UN70 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGC3Q9UN70 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms