Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 KRT18P38-201ENST00000449496 1282 ntBASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 MYC-208ENST00000641036 567 ntBASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 AC024243.1-201ENST00000609234 778 ntBASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 AC126763.1-201ENST00000552015 2118 ntBASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF3C4Q9UKN8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GTF3C4Q9UKN8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 AL031133.1-201ENST00000406807 723 ntBASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 AL390961.4-201ENST00000623958 2535 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms