Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC083906.6-201ENST00000641366 219 ntBASIC16.94■□□□□ 0.3
LRFN1Q9P244 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.94■□□□□ 0.3
LRFN1Q9P244 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN1Q9P244 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.94■□□□□ 0.3
LRFN1Q9P244 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN1Q9P244 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.94■□□□□ 0.3
LRFN1Q9P244 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LRFN1Q9P244 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN1Q9P244 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN1Q9P244 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRFN1Q9P244 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRFN1Q9P244 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN1Q9P244 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN1Q9P244 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN1Q9P244 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN1Q9P244 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN1Q9P244 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN1Q9P244 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN1Q9P244 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN1Q9P244 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN1Q9P244 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN1Q9P244 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 TSPY22P-201ENST00000427496 604 ntBASIC16.93■□□□□ 0.3
LRFN1Q9P244 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 KRT126P-201ENST00000549467 1181 ntBASIC16.93■□□□□ 0.3
LRFN1Q9P244 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 AC092329.2-201ENST00000598402 547 ntBASIC16.93■□□□□ 0.3
LRFN1Q9P244 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN1Q9P244 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 KRT8P50-201ENST00000562022 1438 ntBASIC16.93■□□□□ 0.3
LRFN1Q9P244 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN1Q9P244 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN1Q9P244 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN1Q9P244 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN1Q9P244 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
LRFN1Q9P244 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.92■□□□□ 0.3
LRFN1Q9P244 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.92■□□□□ 0.3
LRFN1Q9P244 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.92■□□□□ 0.3
LRFN1Q9P244 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LRFN1Q9P244 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LRFN1Q9P244 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.92■□□□□ 0.3
LRFN1Q9P244 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.92■□□□□ 0.3
LRFN1Q9P244 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.92■□□□□ 0.3
LRFN1Q9P244 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 AP000593.1-201ENST00000393668 712 ntBASIC16.92■□□□□ 0.3
LRFN1Q9P244 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 AP003733.1-201ENST00000491725 852 ntBASIC16.92■□□□□ 0.3
LRFN1Q9P244 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.92■□□□□ 0.3
LRFN1Q9P244 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LRFN1Q9P244 CLEC4GP1-201ENST00000596555 870 ntBASIC16.92■□□□□ 0.3
LRFN1Q9P244 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.92■□□□□ 0.3
LRFN1Q9P244 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LRFN1Q9P244 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.92■□□□□ 0.3
LRFN1Q9P244 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.92■□□□□ 0.3
LRFN1Q9P244 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.92■□□□□ 0.3
LRFN1Q9P244 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRFN1Q9P244 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRFN1Q9P244 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms