Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.85■□□□□ 0.93
COL20A1Q9P218 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.85■□□□□ 0.93
COL20A1Q9P218 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.85■□□□□ 0.93
COL20A1Q9P218 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL20A1Q9P218 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.85■□□□□ 0.93
COL20A1Q9P218 AC233702.3-201ENST00000578656 1387 ntBASIC20.85■□□□□ 0.93
COL20A1Q9P218 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL20A1Q9P218 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL20A1Q9P218 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL20A1Q9P218 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.84■□□□□ 0.93
COL20A1Q9P218 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL20A1Q9P218 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL20A1Q9P218 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.84■□□□□ 0.93
COL20A1Q9P218 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL20A1Q9P218 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL20A1Q9P218 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL20A1Q9P218 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL20A1Q9P218 NUS1P1-201ENST00000446295 882 ntBASIC20.84■□□□□ 0.93
COL20A1Q9P218 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL20A1Q9P218 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
COL20A1Q9P218 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL20A1Q9P218 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.84■□□□□ 0.93
COL20A1Q9P218 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.84■□□□□ 0.93
COL20A1Q9P218 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.84■□□□□ 0.93
COL20A1Q9P218 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.84■□□□□ 0.93
COL20A1Q9P218 AC124864.1-201ENST00000623408 392 ntBASIC20.84■□□□□ 0.93
COL20A1Q9P218 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL20A1Q9P218 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.84■□□□□ 0.93
COL20A1Q9P218 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL20A1Q9P218 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.84■□□□□ 0.93
COL20A1Q9P218 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL20A1Q9P218 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
COL20A1Q9P218 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
COL20A1Q9P218 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
COL20A1Q9P218 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL20A1Q9P218 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL20A1Q9P218 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL20A1Q9P218 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL20A1Q9P218 LINC01126-201ENST00000623515 1646 ntBASIC20.83■□□□□ 0.93
COL20A1Q9P218 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL20A1Q9P218 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
COL20A1Q9P218 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL20A1Q9P218 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.83■□□□□ 0.93
COL20A1Q9P218 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.83■□□□□ 0.93
COL20A1Q9P218 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
COL20A1Q9P218 AL732292.2-201ENST00000609649 430 ntBASIC20.83■□□□□ 0.93
COL20A1Q9P218 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
COL20A1Q9P218 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.83■□□□□ 0.92
COL20A1Q9P218 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL20A1Q9P218 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL20A1Q9P218 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL20A1Q9P218 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL20A1Q9P218 AL031598.1-201ENST00000561511 1773 ntBASIC20.82■□□□□ 0.92
COL20A1Q9P218 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.82■□□□□ 0.92
COL20A1Q9P218 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL20A1Q9P218 LINC00167-201ENST00000530583 1419 ntBASIC20.82■□□□□ 0.92
COL20A1Q9P218 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL20A1Q9P218 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL20A1Q9P218 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL20A1Q9P218 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.82■□□□□ 0.92
COL20A1Q9P218 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.82■□□□□ 0.92
COL20A1Q9P218 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.82■□□□□ 0.92
COL20A1Q9P218 AC012615.1-201ENST00000565797 1299 ntBASIC20.82■□□□□ 0.92
COL20A1Q9P218 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.82■□□□□ 0.92
COL20A1Q9P218 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
COL20A1Q9P218 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.82■□□□□ 0.92
COL20A1Q9P218 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.82■□□□□ 0.92
COL20A1Q9P218 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.82■□□□□ 0.92
COL20A1Q9P218 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.82■□□□□ 0.92
COL20A1Q9P218 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL20A1Q9P218 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
COL20A1Q9P218 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL20A1Q9P218 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.82■□□□□ 0.92
COL20A1Q9P218 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL20A1Q9P218 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL20A1Q9P218 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.81■□□□□ 0.92
COL20A1Q9P218 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL20A1Q9P218 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.81■□□□□ 0.92
COL20A1Q9P218 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL20A1Q9P218 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL20A1Q9P218 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COL20A1Q9P218 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL20A1Q9P218 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL20A1Q9P218 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.81■□□□□ 0.92
COL20A1Q9P218 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL20A1Q9P218 CROCCP3-202ENST00000420820 1947 ntBASIC20.81■□□□□ 0.92
COL20A1Q9P218 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms