Protein–RNA interactions for Protein: Q9NYF3

FAM53C, Protein FAM53C, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53CQ9NYF3 AL162412.1-201ENST00000567129 965 ntBASIC18.83■□□□□ 0.6
FAM53CQ9NYF3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
FAM53CQ9NYF3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FAM53CQ9NYF3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FAM53CQ9NYF3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.83■□□□□ 0.6
FAM53CQ9NYF3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FAM53CQ9NYF3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
FAM53CQ9NYF3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.82■□□□□ 0.6
FAM53CQ9NYF3 CYP2T1P-202ENST00000641596 2535 ntBASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 KRT18P68-201ENST00000392293 1000 ntBASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
FAM53CQ9NYF3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM53CQ9NYF3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 AC060834.1-201ENST00000443027 2032 ntBASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 AL354811.1-201ENST00000610286 706 ntBASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM53CQ9NYF3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms