Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 AL358472.4-201ENST00000633140 710 ntBASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPHK1Q9NYA1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPHK1Q9NYA1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPHK1Q9NYA1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SPHK1Q9NYA1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPHK1Q9NYA1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.77■□□□□ 0.43
SPHK1Q9NYA1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 AC005332.1-201ENST00000577698 1310 ntBASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 PVRIG2P-201ENST00000435460 978 ntBASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 SDHAP2-201ENST00000455183 2001 ntBASIC17.76■□□□□ 0.43
SPHK1Q9NYA1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 MIR149-201ENST00000384879 89 ntBASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 AL136038.3-201ENST00000561909 1096 ntBASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 AC009102.3-201ENST00000623118 1491 ntBASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SPHK1Q9NYA1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 WIZP1-201ENST00000531444 2299 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms