Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 KRT8P45-201ENST00000414328 1447 ntBASIC17.89■□□□□ 0.46
NDE1Q9NXR1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.89■□□□□ 0.46
NDE1Q9NXR1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
NDE1Q9NXR1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NDE1Q9NXR1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDE1Q9NXR1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 AC006557.6-201ENST00000623071 864 ntBASIC17.88■□□□□ 0.45
NDE1Q9NXR1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NDE1Q9NXR1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms