Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 HOXB1-202ENST00000577092 1414 ntBASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 AC112777.1-201ENST00000540175 1423 ntBASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 AC139887.4-201ENST00000607877 719 ntBASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 AC006011.2-201ENST00000621313 1158 ntBASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 AL358472.4-201ENST00000633140 710 ntBASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 AC104581.1-202ENST00000635932 2618 ntBASIC17.85■□□□□ 0.45
CUEDC1Q9NWM3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 AC117947.1-201ENST00000427448 529 ntBASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 SEC1P-202ENST00000473944 940 ntBASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 COX11P1-201ENST00000489116 835 ntBASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 KRT18P56-201ENST00000507275 550 ntBASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CUEDC1Q9NWM3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CUEDC1Q9NWM3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CUEDC1Q9NWM3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
CUEDC1Q9NWM3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CUEDC1Q9NWM3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CUEDC1Q9NWM3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CUEDC1Q9NWM3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.83■□□□□ 0.45
CUEDC1Q9NWM3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.83■□□□□ 0.45
CUEDC1Q9NWM3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CUEDC1Q9NWM3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CUEDC1Q9NWM3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CUEDC1Q9NWM3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 BX664615.1-201ENST00000443558 458 ntBASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms