Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 AC138932.1-201ENST00000534164 6830 ntBASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 TSPY23P-201ENST00000440136 739 ntBASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 AL445228.2-201ENST00000605589 952 ntBASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 AL645608.8-201ENST00000606034 2086 ntBASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCM2LQ9NUG4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.58■□□□□ 0.41
CCM2LQ9NUG4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCM2LQ9NUG4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.58■□□□□ 0.41
CCM2LQ9NUG4 RCC2P6-201ENST00000526625 1557 ntBASIC17.58■□□□□ 0.41
CCM2LQ9NUG4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
CCM2LQ9NUG4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCM2LQ9NUG4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 AL121906.2-201ENST00000621597 723 ntBASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 AL023875.1-201ENST00000640777 796 ntBASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 MYC-208ENST00000641036 567 ntBASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCM2LQ9NUG4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2LQ9NUG4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms