Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 AC133681.1-201ENST00000465482 601 ntBASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 REXO1L9P-201ENST00000604264 2108 ntBASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 AL353708.3-201ENST00000610272 989 ntBASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 AC110285.5-201ENST00000611501 352 ntBASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 AL109659.2-201ENST00000606809 1674 ntBASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 KSR1P1-201ENST00000446298 240 ntBASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 AP002982.1-201ENST00000492365 877 ntBASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 RNA5SP413-201ENST00000516373 109 ntBASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 CKBP1-201ENST00000565489 1086 ntBASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 AC124016.1-201ENST00000609552 612 ntBASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 LINC00896-202ENST00000609602 2128 ntBASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC42SE2Q9NRR3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 FLJ13224-201ENST00000313737 1514 ntBASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 AL355802.2-201ENST00000402069 882 ntBASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDC42SE2Q9NRR3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms