Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
POLE3Q9NRF9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
POLE3Q9NRF9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
POLE3Q9NRF9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
POLE3Q9NRF9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
POLE3Q9NRF9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
POLE3Q9NRF9 PKD1P1-201ENST00000458669 6805 ntBASIC17.18■□□□□ 0.34
POLE3Q9NRF9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 SNORA78-201ENST00000459373 127 ntBASIC17.17■□□□□ 0.34
POLE3Q9NRF9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 BX088651.1-201ENST00000540551 451 ntBASIC17.17■□□□□ 0.34
POLE3Q9NRF9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 AP000525.1-201ENST00000608286 694 ntBASIC17.17■□□□□ 0.34
POLE3Q9NRF9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 AC116562.4-202ENST00000641738 218 ntBASIC17.17■□□□□ 0.34
POLE3Q9NRF9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 AC104581.1-202ENST00000635932 2618 ntBASIC17.17■□□□□ 0.34
POLE3Q9NRF9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLE3Q9NRF9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 AC092338.2-201ENST00000568827 1415 ntBASIC17.16■□□□□ 0.34
POLE3Q9NRF9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 MIR4674-201ENST00000582457 87 ntBASIC17.16■□□□□ 0.34
POLE3Q9NRF9 MIR4497-201ENST00000583208 89 ntBASIC17.16■□□□□ 0.34
POLE3Q9NRF9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLE3Q9NRF9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 HOXB1-202ENST00000577092 1414 ntBASIC17.15■□□□□ 0.34
POLE3Q9NRF9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.15■□□□□ 0.34
POLE3Q9NRF9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 AP003041.3-201ENST00000527151 707 ntBASIC17.15■□□□□ 0.34
POLE3Q9NRF9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 WWOX-216ENST00000569818 525 ntBASIC17.15■□□□□ 0.34
POLE3Q9NRF9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 AC010653.2-201ENST00000623505 997 ntBASIC17.15■□□□□ 0.34
POLE3Q9NRF9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLE3Q9NRF9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms