Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 MIR3180-5-201ENST00000583743 153 ntBASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEUROD4Q9HD90 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NEUROD4Q9HD90 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 AP003071.4-201ENST00000562276 1284 ntBASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 NOC2LP1-202ENST00000452600 2235 ntBASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.45■□□□□ 0.38
NEUROD4Q9HD90 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 UNC93B2-201ENST00000285383 730 ntBASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.44■□□□□ 0.38
NEUROD4Q9HD90 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms