Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC40Q9H9A6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC40Q9H9A6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.59
LRRC40Q9H9A6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 TSPY14P-201ENST00000303979 915 ntBASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 AC007663.1-201ENST00000438948 1240 ntBASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 WWOX-216ENST00000569818 525 ntBASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 CR769767.2-201ENST00000622735 460 ntBASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LRRC40Q9H9A6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 KRT8P7-201ENST00000533003 1432 ntBASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 HOXB1-202ENST00000577092 1414 ntBASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 AC010653.2-201ENST00000623505 997 ntBASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 AC018470.1-201ENST00000624790 3129 ntBASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LRRC40Q9H9A6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms