Protein–RNA interactions for Protein: Q9GZU7

CTDSP1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1Q9GZU7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTDSP1Q9GZU7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTDSP1Q9GZU7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTDSP1Q9GZU7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTDSP1Q9GZU7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTDSP1Q9GZU7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTDSP1Q9GZU7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTDSP1Q9GZU7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTDSP1Q9GZU7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.27□□□□□ -0.13
CTDSP1Q9GZU7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CTDSP1Q9GZU7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTDSP1Q9GZU7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.27□□□□□ -0.13
CTDSP1Q9GZU7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTDSP1Q9GZU7 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 AC116351.2-201ENST00000606540 1585 ntBASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTDSP1Q9GZU7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 AC233992.3-201ENST00000607491 485 ntBASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 AC006116.8-202ENST00000587620 1550 ntBASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 UBALD1-205ENST00000590891 2641 ntBASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTDSP1Q9GZU7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTDSP1Q9GZU7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTDSP1Q9GZU7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CTDSP1Q9GZU7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTDSP1Q9GZU7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
CTDSP1Q9GZU7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTDSP1Q9GZU7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTDSP1Q9GZU7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CTDSP1Q9GZU7 AC068587.6-202ENST00000641839 5619 ntBASIC14.24□□□□□ -0.13
CTDSP1Q9GZU7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTDSP1Q9GZU7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CTDSP1Q9GZU7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTDSP1Q9GZU7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CTDSP1Q9GZU7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CTDSP1Q9GZU7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms