Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 BID-204ENST00000399767 2129 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 AFG3L1P-217ENST00000557444 2447 ntBASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 CLDN5-201ENST00000403084 2357 ntBASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 PAN3-AS1-201ENST00000563843 1351 ntBASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC005104.2-201ENST00000427818 678 ntBASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 IGHV3-22-201ENST00000520721 359 ntBASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC021087.4-201ENST00000563761 564 ntBASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
KRTAP4-1Q9BYQ7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 INTS4P1-201ENST00000438455 1935 ntBASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 RPS2P1-201ENST00000434010 821 ntBASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 KRT18P41-201ENST00000518924 1277 ntBASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 AL032819.2-201ENST00000624543 2162 ntBASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 AL024508.2-201ENST00000607749 1894 ntBASIC9.55□□□□□ -0.88
KRTAP4-1Q9BYQ7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms