Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 AC112907.2-201ENST00000448639 330 ntBASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 AL136038.4-201ENST00000603606 1261 ntBASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM62Q9BVG3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 AL671277.2-201ENST00000458060 996 ntBASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM62Q9BVG3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 MIR1224-201ENST00000408193 85 ntBASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM62Q9BVG3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 AC087289.5-201ENST00000586076 3175 ntBASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 LINC01311-201ENST00000565162 1445 ntBASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 HLA-F-220ENST00000434407 884 ntBASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 KRT18P38-201ENST00000449496 1282 ntBASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 AC010331.1-201ENST00000611423 582 ntBASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM62Q9BVG3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms