Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 ISG20-202ENST00000379224 540 ntTSL 3 BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 GLRB-205ENST00000512619 728 ntTSL 3 BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 SDHAP1-207ENST00000440850 2000 ntBASIC11.02□□□□□ -0.65
LIMD2Q9BT23 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 LINC01126-201ENST00000623515 1646 ntBASIC11.02□□□□□ -0.65
LIMD2Q9BT23 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LIMD2Q9BT23 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 POU5F1P3-201ENST00000428824 1078 ntBASIC11.01□□□□□ -0.65
LIMD2Q9BT23 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 C1QBPP2-201ENST00000528754 825 ntBASIC11.01□□□□□ -0.65
LIMD2Q9BT23 RN7SL471P-201ENST00000580476 299 ntBASIC11.01□□□□□ -0.65
LIMD2Q9BT23 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 AC124016.1-201ENST00000609552 612 ntBASIC11.01□□□□□ -0.65
LIMD2Q9BT23 AL445675.2-201ENST00000620291 557 ntBASIC11.01□□□□□ -0.65
LIMD2Q9BT23 HLA-A-209ENST00000638375 975 ntBASIC11.01□□□□□ -0.65
LIMD2Q9BT23 AC073648.6-201ENST00000641589 218 ntBASIC11.01□□□□□ -0.65
LIMD2Q9BT23 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
LIMD2Q9BT23 AC124067.4-201ENST00000519691 2379 ntBASIC11.01□□□□□ -0.65
LIMD2Q9BT23 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC11□□□□□ -0.65
LIMD2Q9BT23 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC11□□□□□ -0.65
LIMD2Q9BT23 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC11□□□□□ -0.65
LIMD2Q9BT23 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC11□□□□□ -0.65
LIMD2Q9BT23 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms