Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 TSPY15P-201ENST00000457163 923 ntBASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF4Q9BSR8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 AC135050.7-201ENST00000624508 2218 ntBASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 MIR1238-201ENST00000408483 83 ntBASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 MCCD1P1-208ENST00000445732 328 ntBASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 AC073592.3-201ENST00000625118 1834 ntBASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF4Q9BSR8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.39■□□□□ 0.38
YIPF4Q9BSR8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
YIPF4Q9BSR8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
YIPF4Q9BSR8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.39■□□□□ 0.38
YIPF4Q9BSR8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 AL109659.2-201ENST00000606809 1674 ntBASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms