Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 KRT17P2-201ENST00000300992 1314 ntBASIC15.28■□□□□ 0.04
S1PR3Q99500 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
S1PR3Q99500 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 AC116562.2-201ENST00000507042 360 ntBASIC15.28■□□□□ 0.04
S1PR3Q99500 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.28■□□□□ 0.04
S1PR3Q99500 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.28■□□□□ 0.04
S1PR3Q99500 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.28■□□□□ 0.04
S1PR3Q99500 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.28■□□□□ 0.04
S1PR3Q99500 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.28■□□□□ 0.04
S1PR3Q99500 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.28■□□□□ 0.04
S1PR3Q99500 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
S1PR3Q99500 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
S1PR3Q99500 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.28■□□□□ 0.04
S1PR3Q99500 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.28■□□□□ 0.04
S1PR3Q99500 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.28■□□□□ 0.04
S1PR3Q99500 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.28■□□□□ 0.04
S1PR3Q99500 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.28■□□□□ 0.04
S1PR3Q99500 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
S1PR3Q99500 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.28■□□□□ 0.04
S1PR3Q99500 RCC2P3-201ENST00000418112 1537 ntBASIC15.27■□□□□ 0.04
S1PR3Q99500 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
S1PR3Q99500 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
S1PR3Q99500 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
S1PR3Q99500 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
S1PR3Q99500 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
S1PR3Q99500 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
S1PR3Q99500 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.27■□□□□ 0.04
S1PR3Q99500 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
S1PR3Q99500 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
S1PR3Q99500 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
S1PR3Q99500 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.27■□□□□ 0.04
S1PR3Q99500 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
S1PR3Q99500 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.27■□□□□ 0.04
S1PR3Q99500 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
S1PR3Q99500 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
S1PR3Q99500 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
S1PR3Q99500 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
S1PR3Q99500 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.27■□□□□ 0.04
S1PR3Q99500 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.27■□□□□ 0.04
S1PR3Q99500 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.27■□□□□ 0.04
S1PR3Q99500 AC126763.1-201ENST00000552015 2118 ntBASIC15.27■□□□□ 0.04
S1PR3Q99500 AP003071.4-201ENST00000562276 1284 ntBASIC15.27■□□□□ 0.04
S1PR3Q99500 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.27■□□□□ 0.04
S1PR3Q99500 REXO1L10P-201ENST00000615707 1290 ntBASIC15.27■□□□□ 0.04
S1PR3Q99500 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
S1PR3Q99500 REXO1L12P-201ENST00000622156 912 ntBASIC15.27■□□□□ 0.04
S1PR3Q99500 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
S1PR3Q99500 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.27■□□□□ 0.03
S1PR3Q99500 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
S1PR3Q99500 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
S1PR3Q99500 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
S1PR3Q99500 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
S1PR3Q99500 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
S1PR3Q99500 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
S1PR3Q99500 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
S1PR3Q99500 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.27■□□□□ 0.03
S1PR3Q99500 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
S1PR3Q99500 MTMR9LP-203ENST00000426597 1545 ntBASIC15.27■□□□□ 0.03
S1PR3Q99500 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.27■□□□□ 0.03
S1PR3Q99500 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
S1PR3Q99500 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.27■□□□□ 0.03
S1PR3Q99500 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
S1PR3Q99500 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.27■□□□□ 0.03
S1PR3Q99500 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
S1PR3Q99500 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
S1PR3Q99500 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
S1PR3Q99500 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.26■□□□□ 0.03
S1PR3Q99500 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 AC096733.2-201ENST00000609937 1394 ntBASIC15.26■□□□□ 0.03
S1PR3Q99500 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.26■□□□□ 0.03
S1PR3Q99500 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.26■□□□□ 0.03
S1PR3Q99500 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
S1PR3Q99500 MESTP1-201ENST00000404287 994 ntBASIC15.26■□□□□ 0.03
S1PR3Q99500 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 MFAP1P1-201ENST00000442257 1255 ntBASIC15.26■□□□□ 0.03
S1PR3Q99500 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.26■□□□□ 0.03
S1PR3Q99500 AC097488.1-201ENST00000507834 756 ntBASIC15.26■□□□□ 0.03
S1PR3Q99500 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.26■□□□□ 0.03
S1PR3Q99500 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.26■□□□□ 0.03
S1PR3Q99500 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.26■□□□□ 0.03
S1PR3Q99500 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms