Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 MMP23A-201ENST00000234610 1017 ntBASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 AC093827.2-201ENST00000512654 315 ntBASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 AC010653.2-201ENST00000623505 997 ntBASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 AC066615.1-201ENST00000640911 628 ntBASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHB18PQ96TA0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB18PQ96TA0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDHB18PQ96TA0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHB18PQ96TA0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
PCDHB18PQ96TA0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB18PQ96TA0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHB18PQ96TA0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB18PQ96TA0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB18PQ96TA0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB18PQ96TA0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB18PQ96TA0 AC020763.4-201ENST00000623414 4170 ntBASIC19.58■□□□□ 0.73
PCDHB18PQ96TA0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB18PQ96TA0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 REXO1L9P-201ENST00000604264 2108 ntBASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB18PQ96TA0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 FAM87A-204ENST00000613235 858 ntBASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 PHGDH-209ENST00000641074 1780 ntBASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 AC067852.2-201ENST00000590513 2313 ntBASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB18PQ96TA0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB18PQ96TA0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB18PQ96TA0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB18PQ96TA0 AC008764.6-201ENST00000595909 2069 ntBASIC19.56■□□□□ 0.72
PCDHB18PQ96TA0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHB18PQ96TA0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB18PQ96TA0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB18PQ96TA0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB18PQ96TA0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms