Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASD1Q96PB1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASD1Q96PB1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASD1Q96PB1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
CASD1Q96PB1 AL591684.3-201ENST00000605187 298 ntBASIC19.68■□□□□ 0.74
CASD1Q96PB1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CASD1Q96PB1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASD1Q96PB1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.68■□□□□ 0.74
CASD1Q96PB1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASD1Q96PB1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASD1Q96PB1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CASD1Q96PB1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.68■□□□□ 0.74
CASD1Q96PB1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASD1Q96PB1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASD1Q96PB1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASD1Q96PB1 SDHAP2-201ENST00000455183 2001 ntBASIC19.68■□□□□ 0.74
CASD1Q96PB1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.67■□□□□ 0.74
CASD1Q96PB1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.67■□□□□ 0.74
CASD1Q96PB1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
CASD1Q96PB1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.67■□□□□ 0.74
CASD1Q96PB1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.67■□□□□ 0.74
CASD1Q96PB1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.67■□□□□ 0.74
CASD1Q96PB1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.67■□□□□ 0.74
CASD1Q96PB1 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.67■□□□□ 0.74
CASD1Q96PB1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CASD1Q96PB1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CASD1Q96PB1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CASD1Q96PB1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.67■□□□□ 0.74
CASD1Q96PB1 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.67■□□□□ 0.74
CASD1Q96PB1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CASD1Q96PB1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.67■□□□□ 0.74
CASD1Q96PB1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.67■□□□□ 0.74
CASD1Q96PB1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASD1Q96PB1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.67■□□□□ 0.74
CASD1Q96PB1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.66■□□□□ 0.74
CASD1Q96PB1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASD1Q96PB1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.66■□□□□ 0.74
CASD1Q96PB1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASD1Q96PB1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASD1Q96PB1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASD1Q96PB1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CASD1Q96PB1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASD1Q96PB1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CASD1Q96PB1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASD1Q96PB1 RNA5SP419-201ENST00000515908 135 ntBASIC19.66■□□□□ 0.74
CASD1Q96PB1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.66■□□□□ 0.74
CASD1Q96PB1 AC008687.5-201ENST00000593746 558 ntBASIC19.66■□□□□ 0.74
CASD1Q96PB1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.66■□□□□ 0.74
CASD1Q96PB1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CASD1Q96PB1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASD1Q96PB1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CASD1Q96PB1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASD1Q96PB1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.66■□□□□ 0.74
CASD1Q96PB1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CASD1Q96PB1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.66■□□□□ 0.74
CASD1Q96PB1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.66■□□□□ 0.74
CASD1Q96PB1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CASD1Q96PB1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASD1Q96PB1 MYLKP1-201ENST00000509077 1580 ntBASIC19.66■□□□□ 0.74
CASD1Q96PB1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASD1Q96PB1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASD1Q96PB1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CASD1Q96PB1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASD1Q96PB1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASD1Q96PB1 AL024508.2-201ENST00000607749 1894 ntBASIC19.65■□□□□ 0.74
CASD1Q96PB1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.65■□□□□ 0.74
CASD1Q96PB1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CASD1Q96PB1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CASD1Q96PB1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASD1Q96PB1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CASD1Q96PB1 AC068472.1-201ENST00000474589 881 ntBASIC19.65■□□□□ 0.74
CASD1Q96PB1 AC096582.2-201ENST00000510860 516 ntBASIC19.65■□□□□ 0.74
CASD1Q96PB1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CASD1Q96PB1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.65■□□□□ 0.74
CASD1Q96PB1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.65■□□□□ 0.74
CASD1Q96PB1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CASD1Q96PB1 AC114341.1-201ENST00000618070 349 ntBASIC19.65■□□□□ 0.74
CASD1Q96PB1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASD1Q96PB1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.65■□□□□ 0.74
CASD1Q96PB1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASD1Q96PB1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CASD1Q96PB1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASD1Q96PB1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms