Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRICKLE1Q96MT3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.08■□□□□ 0.64
PRICKLE1Q96MT3 KRT18P41-201ENST00000518924 1277 ntBASIC19.08■□□□□ 0.64
PRICKLE1Q96MT3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
PRICKLE1Q96MT3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.08■□□□□ 0.64
PRICKLE1Q96MT3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.08■□□□□ 0.64
PRICKLE1Q96MT3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PRICKLE1Q96MT3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRICKLE1Q96MT3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.08■□□□□ 0.64
PRICKLE1Q96MT3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRICKLE1Q96MT3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PRICKLE1Q96MT3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRICKLE1Q96MT3 AL499627.1-201ENST00000569373 2188 ntBASIC19.08■□□□□ 0.64
PRICKLE1Q96MT3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.07■□□□□ 0.64
PRICKLE1Q96MT3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 PCED1CP-201ENST00000419887 785 ntBASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 AL136038.3-201ENST00000561909 1096 ntBASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE1Q96MT3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 AL136038.4-201ENST00000603606 1261 ntBASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
PRICKLE1Q96MT3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.04■□□□□ 0.64
PRICKLE1Q96MT3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRICKLE1Q96MT3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PRICKLE1Q96MT3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PRICKLE1Q96MT3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.04■□□□□ 0.64
PRICKLE1Q96MT3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRICKLE1Q96MT3 AL391807.1-203ENST00000604392 2365 ntBASIC19.04■□□□□ 0.64
PRICKLE1Q96MT3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.04■□□□□ 0.64
PRICKLE1Q96MT3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms