Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NSMCE2Q96MF7 FLJ13224-201ENST00000313737 1514 ntBASIC17.47■□□□□ 0.39
NSMCE2Q96MF7 KRT8P3-201ENST00000519669 1449 ntBASIC17.47■□□□□ 0.39
NSMCE2Q96MF7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.47■□□□□ 0.39
NSMCE2Q96MF7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NSMCE2Q96MF7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
NSMCE2Q96MF7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 SLC29A4P1-201ENST00000398760 971 ntBASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 POU5F1P3-201ENST00000428824 1078 ntBASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NSMCE2Q96MF7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
NSMCE2Q96MF7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NSMCE2Q96MF7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NSMCE2Q96MF7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 CROCCP5-201ENST00000436658 830 ntBASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 AC004264.1-201ENST00000608354 794 ntBASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 AC012317.2-201ENST00000623305 2251 ntBASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NSMCE2Q96MF7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 NBPF21P-201ENST00000425093 1451 ntBASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.44■□□□□ 0.38
NSMCE2Q96MF7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.43■□□□□ 0.38
NSMCE2Q96MF7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.43■□□□□ 0.38
NSMCE2Q96MF7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NSMCE2Q96MF7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NSMCE2Q96MF7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NSMCE2Q96MF7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NSMCE2Q96MF7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
NSMCE2Q96MF7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms