Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 AL121906.2-201ENST00000621597 723 ntBASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 KRT8P41-201ENST00000533985 1514 ntBASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.42■□□□□ 0.86
PDLIM2Q96JY6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 AL160286.2-201ENST00000567150 934 ntBASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 KRT8P3-201ENST00000519669 1449 ntBASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 PCDHA14-201ENST00000506751 2298 ntBASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.41■□□□□ 0.86
PDLIM2Q96JY6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 GMCL1P1-201ENST00000463439 1581 ntBASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM2Q96JY6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDLIM2Q96JY6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PDLIM2Q96JY6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.39■□□□□ 0.86
PDLIM2Q96JY6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.39■□□□□ 0.86
PDLIM2Q96JY6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDLIM2Q96JY6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 HTR7P1-201ENST00000538670 1336 ntBASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 KRT18P11-201ENST00000435214 1283 ntBASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 OR10C1-204ENST00000622521 1039 ntBASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM2Q96JY6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms