Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.96■□□□□ 0.79
LRCH3Q96II8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH3Q96II8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH3Q96II8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH3Q96II8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LRCH3Q96II8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH3Q96II8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH3Q96II8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LRCH3Q96II8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH3Q96II8 AC254562.1-201ENST00000417586 456 ntBASIC19.96■□□□□ 0.79
LRCH3Q96II8 AC005034.1-201ENST00000426657 489 ntBASIC19.96■□□□□ 0.79
LRCH3Q96II8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.96■□□□□ 0.79
LRCH3Q96II8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH3Q96II8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.96■□□□□ 0.79
LRCH3Q96II8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.96■□□□□ 0.79
LRCH3Q96II8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.96■□□□□ 0.79
LRCH3Q96II8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.96■□□□□ 0.79
LRCH3Q96II8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.96■□□□□ 0.79
LRCH3Q96II8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.96■□□□□ 0.79
LRCH3Q96II8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.96■□□□□ 0.79
LRCH3Q96II8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH3Q96II8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.79
LRCH3Q96II8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRCH3Q96II8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
LRCH3Q96II8 KRT8P3-201ENST00000519669 1449 ntBASIC19.95■□□□□ 0.78
LRCH3Q96II8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRCH3Q96II8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.95■□□□□ 0.78
LRCH3Q96II8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.95■□□□□ 0.78
LRCH3Q96II8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRCH3Q96II8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRCH3Q96II8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRCH3Q96II8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRCH3Q96II8 AC007274.1-201ENST00000439805 662 ntBASIC19.95■□□□□ 0.78
LRCH3Q96II8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.95■□□□□ 0.78
LRCH3Q96II8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.95■□□□□ 0.78
LRCH3Q96II8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.95■□□□□ 0.78
LRCH3Q96II8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.95■□□□□ 0.78
LRCH3Q96II8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.95■□□□□ 0.78
LRCH3Q96II8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
LRCH3Q96II8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRCH3Q96II8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.95■□□□□ 0.78
LRCH3Q96II8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
LRCH3Q96II8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
LRCH3Q96II8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LRCH3Q96II8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
LRCH3Q96II8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.94■□□□□ 0.78
LRCH3Q96II8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.94■□□□□ 0.78
LRCH3Q96II8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LRCH3Q96II8 CNN2P11-201ENST00000429351 262 ntBASIC19.94■□□□□ 0.78
LRCH3Q96II8 YBX1P5-201ENST00000509441 847 ntBASIC19.94■□□□□ 0.78
LRCH3Q96II8 OR7E14P-202ENST00000530490 1290 ntBASIC19.94■□□□□ 0.78
LRCH3Q96II8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.94■□□□□ 0.78
LRCH3Q96II8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 AC005336.2-201ENST00000593183 939 ntBASIC19.94■□□□□ 0.78
LRCH3Q96II8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.94■□□□□ 0.78
LRCH3Q96II8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.94■□□□□ 0.78
LRCH3Q96II8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
LRCH3Q96II8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.94■□□□□ 0.78
LRCH3Q96II8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LRCH3Q96II8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
LRCH3Q96II8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 AC007952.6-201ENST00000573168 2673 ntBASIC19.94■□□□□ 0.78
LRCH3Q96II8 AC003957.1-201ENST00000625108 2673 ntBASIC19.94■□□□□ 0.78
LRCH3Q96II8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.94■□□□□ 0.78
LRCH3Q96II8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
LRCH3Q96II8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.94■□□□□ 0.78
LRCH3Q96II8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH3Q96II8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH3Q96II8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH3Q96II8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH3Q96II8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH3Q96II8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH3Q96II8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
LRCH3Q96II8 SMG8-203ENST00000578922 2178 ntBASIC19.93■□□□□ 0.78
LRCH3Q96II8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.93■□□□□ 0.78
LRCH3Q96II8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
LRCH3Q96II8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH3Q96II8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH3Q96II8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.93■□□□□ 0.78
LRCH3Q96II8 GK-202ENST00000378941 458 ntTSL 3 BASIC19.93■□□□□ 0.78
LRCH3Q96II8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.93■□□□□ 0.78
LRCH3Q96II8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LRCH3Q96II8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH3Q96II8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.93■□□□□ 0.78
LRCH3Q96II8 ALG1L5P-201ENST00000482043 771 ntBASIC19.93■□□□□ 0.78
LRCH3Q96II8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms