Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.51■□□□□ 0.55
SIPA1Q96FS4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 KRT17P6-201ENST00000453795 1220 ntBASIC18.51■□□□□ 0.55
SIPA1Q96FS4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 AC233702.3-201ENST00000578656 1387 ntBASIC18.51■□□□□ 0.55
SIPA1Q96FS4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SIPA1Q96FS4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SIPA1Q96FS4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SIPA1Q96FS4 LINC00167-201ENST00000530583 1419 ntBASIC18.5■□□□□ 0.55
SIPA1Q96FS4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SIPA1Q96FS4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIPA1Q96FS4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.5■□□□□ 0.55
SIPA1Q96FS4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIPA1Q96FS4 AP000593.1-201ENST00000393668 712 ntBASIC18.5■□□□□ 0.55
SIPA1Q96FS4 EMBP1-201ENST00000458200 901 ntBASIC18.5■□□□□ 0.55
SIPA1Q96FS4 KRT18P31-201ENST00000506277 1292 ntBASIC18.5■□□□□ 0.55
SIPA1Q96FS4 AL592071.1-201ENST00000611956 408 ntBASIC18.5■□□□□ 0.55
SIPA1Q96FS4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIPA1Q96FS4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIPA1Q96FS4 AL353692.3-201ENST00000407031 1396 ntBASIC18.5■□□□□ 0.55
SIPA1Q96FS4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SIPA1Q96FS4 KRT89P-201ENST00000620027 1478 ntBASIC18.5■□□□□ 0.55
SIPA1Q96FS4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SIPA1Q96FS4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.5■□□□□ 0.55
SIPA1Q96FS4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIPA1Q96FS4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIPA1Q96FS4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.5■□□□□ 0.55
SIPA1Q96FS4 MTMR9LP-203ENST00000426597 1545 ntBASIC18.49■□□□□ 0.55
SIPA1Q96FS4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 FDX1P1-201ENST00000449115 551 ntBASIC18.49■□□□□ 0.55
SIPA1Q96FS4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 KRT18P41-201ENST00000518924 1277 ntBASIC18.49■□□□□ 0.55
SIPA1Q96FS4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 AC138894.3-201ENST00000603787 634 ntBASIC18.49■□□□□ 0.55
SIPA1Q96FS4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIPA1Q96FS4 AL163051.1-201ENST00000569214 1512 ntBASIC18.49■□□□□ 0.55
SIPA1Q96FS4 KRT8P10-201ENST00000450021 1447 ntBASIC18.49■□□□□ 0.55
SIPA1Q96FS4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 RN7SL606P-201ENST00000472779 293 ntBASIC18.48■□□□□ 0.55
SIPA1Q96FS4 VENTXP7-201ENST00000475503 772 ntBASIC18.48■□□□□ 0.55
SIPA1Q96FS4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 AC099336.1-202ENST00000602961 463 ntBASIC18.48■□□□□ 0.55
SIPA1Q96FS4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms