Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RAPGEF4Q8WZA2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 AC113404.2-201ENST00000507884 177 ntBASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 AC008687.5-201ENST00000593746 558 ntBASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 AL671883.3-201ENST00000603274 991 ntBASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 NME4-212ENST00000621774 904 ntTSL 3 BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RAPGEF4Q8WZA2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 AC093484.2-201ENST00000580996 2166 ntBASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 AC007952.6-201ENST00000573168 2673 ntBASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 AC003957.1-201ENST00000625108 2673 ntBASIC24.17■■□□□ 1.46
RAPGEF4Q8WZA2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 AC009102.3-201ENST00000623118 1491 ntBASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAPGEF4Q8WZA2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 IL9RP2-201ENST00000423948 1312 ntBASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 KRT18P67-201ENST00000432816 1264 ntBASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 AF228730.7-201ENST00000641842 219 ntBASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC24.15■■□□□ 1.46
RAPGEF4Q8WZA2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms