Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 AC011767.1-201ENST00000617410 1153 ntBASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 AC231657.2-201ENST00000624556 255 ntBASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM4Q8WVI0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.78■□□□□ 0.12
SMIM4Q8WVI0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms