Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DEPDC1BQ8WUY9 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
DEPDC1BQ8WUY9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 NPAP1P7-201ENST00000613027 823 ntBASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.54■□□□□ 0.72
DEPDC1BQ8WUY9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 GPAT2P1-201ENST00000444924 1672 ntBASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DEPDC1BQ8WUY9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms