Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 KRASP1-201ENST00000407852 552 ntBASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 AC004951.3-201ENST00000418645 1148 ntBASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 KRT17P3-201ENST00000420566 1262 ntBASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 AC133681.1-201ENST00000465482 601 ntBASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 AC006058.3-201ENST00000606217 1069 ntBASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4Y2Q8TD47 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 AL645608.8-201ENST00000606034 2086 ntBASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 AC006116.8-202ENST00000587620 1550 ntBASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 AL023875.1-201ENST00000640777 796 ntBASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 PHGDH-209ENST00000641074 1780 ntBASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.18■□□□□ 0.18
RPS4Y2Q8TD47 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 MIR564-202ENST00000385049 94 ntBASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 AC239809.2-201ENST00000415381 517 ntBASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 AC026271.3-201ENST00000571884 352 ntBASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 AC124016.1-201ENST00000609552 612 ntBASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 AC012317.2-201ENST00000623305 2251 ntBASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 GMCL1P1-201ENST00000463439 1581 ntBASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RPS4Y2Q8TD47 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms