Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
LMO3Q8TAP4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 AC133561.5-201ENST00000635547 218 ntBASIC19.8■□□□□ 0.76
LMO3Q8TAP4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMO3Q8TAP4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 AL024508.2-201ENST00000607749 1894 ntBASIC19.79■□□□□ 0.76
LMO3Q8TAP4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LMO3Q8TAP4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 AC073508.3-201ENST00000619697 1419 ntBASIC19.78■□□□□ 0.76
LMO3Q8TAP4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LMO3Q8TAP4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 AL096828.2-201ENST00000567259 1965 ntBASIC19.77■□□□□ 0.76
LMO3Q8TAP4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 MIR3917-201ENST00000580971 93 ntBASIC19.77■□□□□ 0.76
LMO3Q8TAP4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LMO3Q8TAP4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
LMO3Q8TAP4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LMO3Q8TAP4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
LMO3Q8TAP4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms