Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH19Q8TAB3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDH19Q8TAB3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH19Q8TAB3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH19Q8TAB3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDH19Q8TAB3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
PCDH19Q8TAB3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH19Q8TAB3 AL163051.1-201ENST00000569214 1512 ntBASIC19.08■□□□□ 0.64
PCDH19Q8TAB3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH19Q8TAB3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH19Q8TAB3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH19Q8TAB3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH19Q8TAB3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH19Q8TAB3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH19Q8TAB3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 KRT8P7-201ENST00000533003 1432 ntBASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PCDH19Q8TAB3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 KRT18P22-201ENST00000402024 1347 ntBASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 AC020763.4-201ENST00000623414 4170 ntBASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 AC005521.1-201ENST00000393351 872 ntBASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 AC113347.1-201ENST00000413321 391 ntBASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 AC092865.7-201ENST00000641832 219 ntBASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 SDHAP2-201ENST00000455183 2001 ntBASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH19Q8TAB3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms