Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 KRT8P50-201ENST00000562022 1438 ntBASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 AC090164.3-201ENST00000610780 2143 ntBASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 ECEL1P3-201ENST00000427961 737 ntBASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 ATP5G1P1-201ENST00000448724 379 ntBASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 AL499627.1-201ENST00000569373 2188 ntBASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRFBP1Q8NEF9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 AC009947.2-201ENST00000444014 672 ntBASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 AC104390.1-201ENST00000555663 520 ntBASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 AL031432.5-201ENST00000641059 760 ntBASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.62■□□□□ 0.41
SRFBP1Q8NEF9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 AC126763.1-201ENST00000552015 2118 ntBASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 AC141257.4-201ENST00000634557 245 ntBASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 AC136944.6-201ENST00000634818 245 ntBASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFBP1Q8NEF9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms