Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 PPP1R14BP5-201ENST00000440334 435 ntBASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 KSR1P1-201ENST00000446298 240 ntBASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 CKBP1-201ENST00000565489 1086 ntBASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 AC008403.3-201ENST00000598924 454 ntBASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 AC069544.1-201ENST00000609399 999 ntBASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 AC239809.2-201ENST00000415381 517 ntBASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 AL353807.1-201ENST00000427475 662 ntBASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 AC133681.1-201ENST00000465482 601 ntBASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 AC091390.4-202ENST00000476426 537 ntBASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 AP003097.1-201ENST00000530657 1135 ntBASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 AC098934.4-201ENST00000564127 592 ntBASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 AL109923.1-201ENST00000618799 583 ntBASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 GMCL1P1-201ENST00000463439 1581 ntBASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
LINC01561Q8N1V8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 MIR564-202ENST00000385049 94 ntBASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms