Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 FLJ13224-201ENST00000313737 1514 ntBASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM42Q8IWZ5 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM42Q8IWZ5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 PNMA6B-201ENST00000538162 1200 ntBASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 AC060766.5-201ENST00000590539 871 ntBASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 AC008556.1-201ENST00000610908 2040 ntBASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM42Q8IWZ5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 KRT8P41-201ENST00000533985 1514 ntBASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms