Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.48■□□□□ 0.55
CRLF3Q8IUI8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 AC135776.1-201ENST00000319817 2481 ntBASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 Z99916.2-201ENST00000604037 246 ntBASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 AC110285.5-201ENST00000611501 352 ntBASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 AC134043.2-201ENST00000624206 2238 ntBASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 AL499627.1-201ENST00000569373 2188 ntBASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.47■□□□□ 0.55
CRLF3Q8IUI8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 AL121829.2-201ENST00000620908 328 ntBASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CRLF3Q8IUI8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CRLF3Q8IUI8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 LINC00896-202ENST00000609602 2128 ntBASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 MYC-208ENST00000641036 567 ntBASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CRLF3Q8IUI8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CRLF3Q8IUI8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms