Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 RNF152P1-201ENST00000397754 604 ntBASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 TSPY5P-201ENST00000426936 936 ntBASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
CBWD2Q8IUF1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 SPDYE15P-201ENST00000424157 909 ntBASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 DUX4L26-201ENST00000489078 1255 ntBASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.06■□□□□ 0.8
CBWD2Q8IUF1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 KRT18P38-201ENST00000449496 1282 ntBASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 MIR3180-4-201ENST00000582223 153 ntBASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 AC009102.3-201ENST00000623118 1491 ntBASIC20.05■□□□□ 0.8
CBWD2Q8IUF1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CBWD2Q8IUF1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD2Q8IUF1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD2Q8IUF1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CBWD2Q8IUF1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CBWD2Q8IUF1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD2Q8IUF1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD2Q8IUF1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CBWD2Q8IUF1 MIR149-201ENST00000384879 89 ntBASIC20.04■□□□□ 0.8
CBWD2Q8IUF1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.04■□□□□ 0.8
CBWD2Q8IUF1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.04■□□□□ 0.8
CBWD2Q8IUF1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms