Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIM50Q86XT4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM50Q86XT4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.58■□□□□ 0.89
TRIM50Q86XT4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM50Q86XT4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TRIM50Q86XT4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM50Q86XT4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM50Q86XT4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM50Q86XT4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM50Q86XT4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.58■□□□□ 0.89
TRIM50Q86XT4 TOB2P1-201ENST00000469761 992 ntBASIC20.58■□□□□ 0.89
TRIM50Q86XT4 UNC93B7-201ENST00000509439 705 ntBASIC20.58■□□□□ 0.89
TRIM50Q86XT4 AP000867.3-201ENST00000524675 377 ntBASIC20.58■□□□□ 0.89
TRIM50Q86XT4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.58■□□□□ 0.89
TRIM50Q86XT4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIM50Q86XT4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM50Q86XT4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM50Q86XT4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM50Q86XT4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM50Q86XT4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM50Q86XT4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TRIM50Q86XT4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM50Q86XT4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 IGHGP-201ENST00000390555 1178 ntBASIC20.57■□□□□ 0.88
TRIM50Q86XT4 DRAXINP1-201ENST00000437611 948 ntBASIC20.57■□□□□ 0.88
TRIM50Q86XT4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 GPR32P1-201ENST00000601788 811 ntBASIC20.57■□□□□ 0.88
TRIM50Q86XT4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM50Q86XT4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 AC026396.1-201ENST00000419388 421 ntBASIC20.56■□□□□ 0.88
TRIM50Q86XT4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 AC024563.2-201ENST00000603282 481 ntBASIC20.56■□□□□ 0.88
TRIM50Q86XT4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 AL691432.3-201ENST00000621860 400 ntBASIC20.56■□□□□ 0.88
TRIM50Q86XT4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 AL163051.1-201ENST00000569214 1512 ntBASIC20.56■□□□□ 0.88
TRIM50Q86XT4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM50Q86XT4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 AL499627.1-201ENST00000569373 2188 ntBASIC20.55■□□□□ 0.88
TRIM50Q86XT4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 TPM4P1-201ENST00000436100 807 ntBASIC20.55■□□□□ 0.88
TRIM50Q86XT4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms