Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
LDB1Q86U70 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LDB1Q86U70 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LDB1Q86U70 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LDB1Q86U70 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LDB1Q86U70 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LDB1Q86U70 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LDB1Q86U70 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.45■□□□□ 0.54
LDB1Q86U70 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LDB1Q86U70 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.45■□□□□ 0.54
LDB1Q86U70 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LDB1Q86U70 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.45■□□□□ 0.54
LDB1Q86U70 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LDB1Q86U70 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LDB1Q86U70 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LDB1Q86U70 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LDB1Q86U70 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LDB1Q86U70 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LDB1Q86U70 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.45■□□□□ 0.54
LDB1Q86U70 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LDB1Q86U70 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LDB1Q86U70 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
LDB1Q86U70 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.44■□□□□ 0.54
LDB1Q86U70 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LDB1Q86U70 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.44■□□□□ 0.54
LDB1Q86U70 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LDB1Q86U70 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.44■□□□□ 0.54
LDB1Q86U70 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.44■□□□□ 0.54
LDB1Q86U70 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LDB1Q86U70 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LDB1Q86U70 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LDB1Q86U70 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LDB1Q86U70 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LDB1Q86U70 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LDB1Q86U70 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LDB1Q86U70 KRT18P41-201ENST00000518924 1277 ntBASIC18.44■□□□□ 0.54
LDB1Q86U70 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.44■□□□□ 0.54
LDB1Q86U70 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.44■□□□□ 0.54
LDB1Q86U70 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.44■□□□□ 0.54
LDB1Q86U70 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LDB1Q86U70 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LDB1Q86U70 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LDB1Q86U70 ESPNP-201ENST00000270691 2015 ntBASIC18.44■□□□□ 0.54
LDB1Q86U70 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.44■□□□□ 0.54
LDB1Q86U70 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LDB1Q86U70 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
LDB1Q86U70 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.43■□□□□ 0.54
LDB1Q86U70 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.43■□□□□ 0.54
LDB1Q86U70 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
LDB1Q86U70 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.43■□□□□ 0.54
LDB1Q86U70 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.43■□□□□ 0.54
LDB1Q86U70 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
LDB1Q86U70 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LDB1Q86U70 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.43■□□□□ 0.54
LDB1Q86U70 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
LDB1Q86U70 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LDB1Q86U70 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.43■□□□□ 0.54
LDB1Q86U70 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LDB1Q86U70 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LDB1Q86U70 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LDB1Q86U70 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LDB1Q86U70 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LDB1Q86U70 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.42■□□□□ 0.54
LDB1Q86U70 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LDB1Q86U70 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LDB1Q86U70 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.42■□□□□ 0.54
LDB1Q86U70 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.42■□□□□ 0.54
LDB1Q86U70 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.42■□□□□ 0.54
LDB1Q86U70 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.42■□□□□ 0.54
LDB1Q86U70 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.42■□□□□ 0.54
LDB1Q86U70 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.42■□□□□ 0.54
LDB1Q86U70 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.42■□□□□ 0.54
LDB1Q86U70 FAM87A-204ENST00000613235 858 ntBASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms