Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 GCSHP2-201ENST00000560971 527 ntBASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 AL049597.2-201ENST00000565575 961 ntBASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 AC140113.3-201ENST00000605663 199 ntBASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 AC011558.1-201ENST00000623459 338 ntBASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 MYC-208ENST00000641036 567 ntBASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 AP000593.1-201ENST00000393668 712 ntBASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 AC104390.1-201ENST00000555663 520 ntBASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 AC099343.3-201ENST00000605834 2503 ntBASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 MYLKP1-201ENST00000509077 1580 ntBASIC18.55■□□□□ 0.56
LYSMD3Q7Z3D4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 AK4P3-201ENST00000418260 669 ntBASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD3Q7Z3D4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms