Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FOXR1Q6PIV2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FOXR1Q6PIV2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FOXR1Q6PIV2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
FOXR1Q6PIV2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FOXR1Q6PIV2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FOXR1Q6PIV2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FOXR1Q6PIV2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
FOXR1Q6PIV2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 HTR7P1-201ENST00000538670 1336 ntBASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 RCN1P1-201ENST00000400413 996 ntBASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 GNAS-203ENST00000306120 1878 ntBASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXR1Q6PIV2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXR1Q6PIV2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms