Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNKSR3Q6P9H4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.83■□□□□ 0.76
CNKSR3Q6P9H4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNKSR3Q6P9H4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CNKSR3Q6P9H4 AC009102.3-201ENST00000623118 1491 ntBASIC19.83■□□□□ 0.76
CNKSR3Q6P9H4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNKSR3Q6P9H4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.83■□□□□ 0.76
CNKSR3Q6P9H4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNKSR3Q6P9H4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
CNKSR3Q6P9H4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNKSR3Q6P9H4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNKSR3Q6P9H4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNKSR3Q6P9H4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNKSR3Q6P9H4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CNKSR3Q6P9H4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 FAM220CP-201ENST00000395253 831 ntBASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.82■□□□□ 0.76
CNKSR3Q6P9H4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 INTS4P1-201ENST00000438455 1935 ntBASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNKSR3Q6P9H4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNKSR3Q6P9H4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms